Publications

* corresponding author(s), contributed equally

27. Sathyan D and Sunbul M*
A bright green tag for RNA imaging
Nature Chemical Biology, 2024, in press

26. Bühler B and Sunbul M*
Single-molecule RNA imaging in live cells with an avidity-based fluorescent light-up aptamer biRhoBAST
Methods in Molecular Biology, 2024, in press

25. Grün F, van den Bergh N, Klevanski M, Verma M S, Bühler B, Nienhaus G U, Kuner T, Jäschke A* and Sunbul M*
Super-resolved protein imaging using bifunctional light-up aptamers
BioRxiv, 2024 [Article]

24. Englert D, Burger E, Grün F, Verma M S, Lackner J, Lampe M, Bühler B, Schokolowski J, Nienhaus G U*, Jäschke A* and Sunbul M*
Fast-exchanging spirocyclic rhodamine probes for aptamer-based super-resolution RNA imaging
Nature Communications, 2023, 14, 3879 [Article]

23. Bühler B, Schokolowski J, Benderoth A, Englert D, Grün F, Jäschke A* and Sunbul M*
Avidity-based bright and photostable light-up aptamers for single-molecule mRNA imaging
Nature Chemical Biology, 2023, 19, 478 [Article]

22. Bühler B, Schokolowski J, Jäschke A* and Sunbul M*
Programmable, structure-switching RhoBAST for hybridization-mediated mRNA imaging in living cells
ACS Chemical Biology, 2023, 18, 1838 [Article]

21. Sunbul M*, Lackner J, Martin A, Englert D, Hacene B, Grün F, Nienhaus K, Nienhaus G U* and Jäschke A*
Super-resolution RNA imaging using a rhodamine-binding aptamer with fast exchange kinetics
Nature Biotechnology, 2021, 39, 686 [Article]

20. Zhang J, Wang L, Jäschke A* and Sunbul M*
A color-shifting near-infrared fluorescent aptamer-fluorophore module for live-cell RNA imaging
Angewandte Chemie International Edition, 2021, 60, 21441 [Article]

19. Englert D, Matveeva R, Sunbul M*, Wombacher R* and Jäschke A*
Aptamer-based proximity labeling guides covalent RNA modification
Chemical Communications, 2021, 57, 3480 [Article]

18. Öztürk S, Kalter V, Roessner P M, Sunbul M, Seiffert M*
IDO1-targeted therapy does not control disease development in the Eµ-TCL1 mouse model of chronic lymphocytic leukemia
Cancers, 2021, 13, 1899 [Article]

17. Wirth R, Gao P, Nienhaus G U, Sunbul M* and Jäschke A*
Confocal and super-resolution imaging of RNA in live bacteria using a fluorogenic silicon rhodamine-binding aptamer Bio-protocol, 2020, 10, e3603 [Article]

16. Sunbul M and Jäschke A
Proximity Labeling: Methods and Protocols Humana Press: New York, 2019
(Editor of the book) [Book]

15. Wirth R, Gao P, Nienhaus G U, Sunbul M* and Jäschke A*
SiRA: a silicon rhodamine-binding aptamer for live-cell super-resolution RNA imaging
Journal of the American Chemical Society, 2019, 141, 7562 [Article]

14. Sunbul M* and Jäschke A*
Proximity-driven site-specific and covalent labeling of proteins with a TexasRed fluorophore reacting (ReacTR) peptide tag
Methods in Molecular Biology, 2019, 2008, 179, 2008, 179 [Article]

13. Sunbul M and Jäschke A*
SRB-2: a promiscuous rainbow aptamer for live-cell RNA imaging
Nucleic Acids Research, 2018, 46 (18), e110 [Article]

12. Sunbul M*, Arora A and Jäschke A
Visualizing RNA in live bacterial cells using fluorophore- and quencher-binding aptamers
Methods in Molecular Biology, 2018, 1649, 289 [Article]

11. Sunbul M, Nacheva L and Jäschke A*
Proximity-induced covalent labeling of proteins with a reactive fluorophore-binding peptide tag
Bioconjugate Chemistry, 2015, 26, 1466 [Article]

10. Arora A†, Sunbul M† and Jäschke A*
Dual-colour imaging of RNAs using quencher- and fluorophore- binding aptamers
Nucleic Acids Research, 2015, 43, e144 [Article]

9. Sunbul M and Jäschke A*
Contact-mediated quenching for RNA imaging in bacteria with a fluorophore-binding aptamer
Angewandte Chemie International Edition, 2013, 52, 1340 [Article]

8. Sunbul M, Emerson N and Yin J*
Enzyme catalyzed substrate attachment to phage surface for the selection of catalytic activities
ChemBioChem, 2011, 12, 380 [Article]

7. Wegner S V, Ertem E, Sunbul M and He C*
Metal-binding properties of Hpn from Helicobacter pylori and implications for the therapeutic activity of bismuth
Chemical Science, 2011, 2, 451 [Article]

6. Wegner S V, Arslan H, Sunbul M, Yin J and He C*
Dynamic copper (I) imaging in mammalian cells with a genetically encoded fluorescent copper (I) sensor
Journal of the American Chemical Society, 2010, 132, 2567 [Article]

5. Sunbul M†, Marshall N J†, Zou Y K†, Zhang K and Yin J*
Catalytic turnover-based phage selection for engineering the substrate specificity of Sfp phosphopantetheinyl transferase
Journal of Molecular Biology, 2009, 387, 883 [Article]

4. Sunbul M and Yin J*
Site specific protein labeling by enzymatic posttranslational modification
Organic and Biomolecular Chemistry, 2009, 7, 3361 [Article]

3. Sunbul M, Zhang K and Yin J*
Using phosphopantetheinyl transferases for enzyme posttranslational activation, site specific protein labeling and identification of natural product biosynthetic gene clusters from bacterial genomes
Methods in Enzymology, 2009, 458, 255 [Article]

2. Sunbul M, Yen M, Zou Y K and Yin J*
Enzyme catalyzed site-specific protein labeling and cell imaging with quantum dots
Chemical Communications, 2008, 45, 5927 [Article]

1. Tanyeli C* and Sunbul M
Asymmetric synthesis of 1,4-amino alcohol ligands with a norbornene backbone for use in the asymmetric diethylzinc addition to benzaldehyde
Tetrahedron: Asymmetry, 2005, 16, 2039 [Article]